Citing InstanSeg

If you use InstanSeg in your research, please cite the paper that matches your use.

Nucleus segmentation in brightfield histology images:

Goldsborough, T. et al. (2024) “InstanSeg: an embedding-based instance segmentation algorithm optimized for accurate, efficient and portable cell segmentation”. arXiv. https://doi.org/10.48550/arXiv.2408.15954

Nucleus and/or cell segmentation in fluorescence images:

Goldsborough, T. et al. (2024) “A novel channel invariant architecture for the segmentation of cells and nuclei in multiplexed images using InstanSeg”. bioRxiv, p. 2024.09.04.611150. https://doi.org/10.1101/2024.09.04.611150